- For Patients
- Introduction to the Marshall Protocol
- Length of the MP
- Immunopathology
- Managing immunopathology
- Food and drink
- Light restriction
- Vitamin D metabolite calculator - get feedback on vitamin D results
- Therapeutic probe - best method for determining MP suitability
- Starting the Marshall Protocol
- Resources for patients
- Marshall Protocol summary
- Palliative vs. curative treatments
- Patient interviews on Bacteriality
- Non-MP treatments
- Glossary
- The Protocol
- Marshall Protocol summary
- Publications and presentations
- Science behind immunopathology
- Science behind olmesartan (Benicar)
- Safety of olmesartan
- Resources for physicians
- Vitamin D metabolite calculator - get feedback on vitamin D results
- Therapeutic probe - best method for determining MP suitability
- Physicians' concerns about the MP
- Notice for emergency medical personnel
- The Pathogenesis
- Publications and presentations
- Science behind Marshall Pathogenesis
- Microbes in the human body
- Successive infection and variability in disease
- Autoimmune theory of disease
- Science behind vitamin D
- Metabolism of vitamin D and the VDR
- Th1 Spectrum Disorder - how chronic inflammatory diseases are related
- Transmission of bacteria and onset of chronic disease
- Evolutionary perspective on disease
- Incidence and prevalence of disease
- Evidence that chronic disease is caused by pathogens
- Diseases
- Foundation
- Related Sites
Table of Contents
Customizations
The currently deployed MP KB wiki uses the latest Dokuwiki release 2010-11-07a “Anteater” with the following customizations:
Installed html template
The look and feel presented by the wiki is created by a template (derived from the “default” template) with the name fwright, located in the ~/lib/tpl/fwright directory.
The template's footer.html has been modified to invoke google-analytics.
Any styles customized for the plugins have been added to the end of design.css file in fwright template.
Installed plugins
| Plugin | Notes | Requires | Dokuwiki Page | Download Link |
|---|---|---|---|---|
| backlinks2 | in use | - | plugin:backlinks2 | download |
| bio | Biochem | - | plugin:bio | download |
| blockquote | in use | - | plugin:blockquote | download |
| boxes | in use | - | plugin:boxes | download |
| cache | in use | - | plugin:cache | download |
| cloud | in use | tag | plugin:cloud | download |
| gallery | in use | - | plugin:gallery | download |
| hidesection | in use | custom | ||
| imagebox | in use | - | plugin:imagebox | download |
| include | in use | - | plugin:include | download |
| note | in use | - | plugin:note | download |
| orphans wanted | in use | - | plugin:orphanswanted | |
| pagelist | in use | - | plugin:pagelist | download |
| pagemove | deleted so as to remove the temptation to use; Chi is working on a new version | version 2010-02-18 (latest official version is faulty) | plugin:pagemove | download |
| phpinc | 4 D-int | - | plugin:phpinc | download |
| pubmed | in use | bio, cache | plugin:pubmed | download |
| recommend | not in use | custom | ||
| redirect | in use | - | plugin:redirect | download |
| searchtext | in use | text | plugin:searchtext | download |
| showlogin | in use | - | plugin:showlogin | download |
| styler | in use | - | plugin:styler | download |
| tag | in use | pagelist | plugin:tag | download |
| text | in use | - | plugin:text | download |
| vshare | 4 vimeo | - | plugin:vshare | download |
Plugin customizations
Plugin files modified for the MP KB wiki:
| Plugin | Files modified |
|---|---|
| blockquote | quote.php - deleted “<p>” and “</p>” so it would validate |
| cache | plugin_cache.php [line 10] - added “require_once(DOKU_INC.'inc/auth.php');” |
| cloud | style.css |
| gallery | style.css |
| include | helper.php, conf/default.php, syntax/readmore.php |
| note | style.css, syntax.php |
| orphans wanted | syntax.php [line 167] |
| pubmed | style.css, syntax.php |
| tag | syntax/tag.php, action.php, style.css |
The most significant customization is that the style.css files in each plugin have been saved in their respective directories (each with the name style.css.dist).
All styles necessary for the plugins have been added to the end of design.css file in fwright template.
Other customizations
- /inc/lang/en/edit.txt (Removed the “edit the page…” text to lengthen the screen)
- /inc/parser/xhtml.php few customizations between line 70-80 and removed parentheses line 267
- /inc/template.php - commented out some lines between 840 and 850 to shorten the bottom right div so that the buttons in the bottom left can remain valign: top (annoying)
- lots of files in /conf using the “local…” syntax
- /inc/preload.php - removes all but fatal errors
- /inc/lang/en/lang.php - changed “login” to “admin login”
home/devel/customizations.txt · Last modified: 07.04.2022 by 127.0.0.1
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