Paul's Notes

• one

• one

1. Redesigned front page
2. move moowheel to an iframe

1. PLoS-like hover
2. End user functionalities:
   • Allow users to click to switch stylesheets (Beware, the plugin tplSwitcher generates a file called /conf/local.protected.php that screws up current version of Dokuwiki)
   • Allow users to click to increase font size
   • CSS stylesheet switcher
3. Host autoimmunityresearch.org on the KB using a modified version of this template
4. This error came back: “Warning: array_diff() [function.array-diff]: Argument #1 is not an array in /home/jsmith/domains/mp-dev.com/public_html/mpkb/lib/plugins/tag/helper.php on line 276” Not sure what happened. I might have overwritten your original fix. :( … Actually, I haven't seen this in a while, so maybe it went away.
5. put PMIDs inside thumbinner class
6. get the filter to work here
7. Use Google Analytics to track outbound links https://davidwalsh.name/mootools-google-analytics-track-outbound-links
8. download as PDF plugin? https://www.dokuwiki.org/plugins?plugintag=pdf or this: https://www.dokuwiki.org/tips:pdfexport
9. allow for links to tags without showing the world background image, i.e. immunosuppressants
10. Dropdown - JQuery conflicts with Dokuwiki; do a workaround? do I even need jquery???
    • https://stackoverflow.com/questions/134572/jquery-prototype-conflict
    • https://stackoverflow.com/questions/490426/can-dokuwiki-jquery-play-together

<mainarticle>  ...  </article>
<relatedarticles>  ...  </article>
<relatedarticle>  ...  </article>
{{section>:&noheader&firstseconly}}
(({{pmid>long:}}))
{{backlinks>.}}
{{topic>papers presentations -+}}

Wiki syntax

• High C-reactive protein is associated with cardiovascular diseases but doesn't cause it.
• Low 25-DThe vitamin D metabolite widely (and erroneously) considered best indicator of vitamin D "deficiency." Inactivates the Vitamin D Nuclear Receptor. Produced by hydroxylation of vitamin D3 in the liver. is associated with dozens of inflammatory diseases but doesn't cause them.
• High total cholesterol is associated with cardiovascular diseases but don't cause them.
• Neurological deposits of amyloid protein is associated with Alzheimer's disease but don't cause it.

1. Emergency Is this an emergency?

2. Light exposure Patients on the Marshall ProtocolA curative medical treatment for chronic inflammatory disease. Based on the Marshall Pathogenesis. may find their symptoms become worse after exposing their eyes to indoor light or sunlight, or exposing their skin to sunlight. A reaction may occur within several seconds or may take as long as 24-48 hours to occur.

Did disease symptoms increase following light exposure? (Yes | No) * If yes:

1. Has the patient been blocking light from the eyes using NoIR sunglassesSpecial sunglasses worn by Marshall Protocol patients to block light. or other glasses that block infrared light? (Yes | No)
2. Has the patient been blocking light from his or her skin? (Yes | No)
   • If yes to either question, print links for blocking light from eyes/skin.
   • If no to both questions, patients may find that their levels of photosensitivityAbnormal sensitivity to sunlight and bright lights. Also referred to as "sun flare" or "light flare." can vary over time even without any changes in lifestyle.

* If no, question 3.

3. Antibiotic doses Increases in the dose of Marshall Protocol antibiotics often corresponds to an increase in immunopathologyA temporary increase in disease symptoms experienced by Marshall Protocol patients that results from the release of cytokines and endotoxins as disease-causing bacteria are killed./herx.

Has the patient recently increased his or her dose of antibiotics? (Yes | No) * If yes: Marshall Protocol patients who are experiencing intolerable immunopathologyAn unbearable or unsafe severity of bacterial die-off reaction. should decrease their dose of antibiotics to the last dose at which they were experiencing tolerable immunopathologyA state in which a patient has maintained an acceptable intensity of bacterial die-off reaction. The primary goal of the Marshall Protocol.. As straightforward as this advice may sound, the choice to reduce one's antibiotics is one that a number of patients have difficulty making. Decreasing one's antibiotics is not an admission of defeat. MP patients can make progress at any dose of antibiotics. * If no, question 4.

• https://loadimpact.com/result/mpkb.mp-dev.com-31153552013631787a0b9a9d35374807

• https://www.smashingmagazine.com/2009/04/03/8-simple-ways-to-improve-typography-in-your-designs/
• https://www.typetester.org/
• https://psd.tutsplus.com/articles/techniques/a-20-minute-intro-to-typography-basics/
• https://designm.ag/inspiration/typography/
• https://workshop.3point7designs.com/style-guide/
• https://www.webdesignerwall.com/wp-content/uploads/2007/12/typographic-contrast.gif
• https://www.smileycat.com/miaow/archives/typography-for-headlines-2.php
• https://typesites.com/typographica/
• https://www.cssaddict.com/blog/websites-with-excellent-css-typography-design/
• https://www.456bereastreet.com/archive/200608/light_text_on_dark_background_vs_readability/
• https://www.3point7designs.com/blog/2008/06/02/10-examples-of-beautiful-css-typography-and-how-they-did-it/

• https://css-tricks.com/examples/SimplejQueryDropdowns/index.html
• https://www.sitepoint.com/blogs/2009/03/31/make-a-mega-drop-down-menu-with-jquery/
• https://www.smashingmagazine.com/2009/04/06/showcase-of-well-designed-tabbed-navigation/
• https://www.smashingmagazine.com/2009/03/24/designing-drop-down-menus-examples-and-best-practices/
• https://www.1stwebdesigner.com/resources/36-eye-catching-jquery-navigation-menus/

• https://vandelaydesign.com/blog/galleries/website-backgrounds/#more-636
• https://sixrevisions.com/tutorials/photoshop-tutorials/make-high-impact-backgrounds-for-your-designs-with-photoshop/
• https://www.smashingmagazine.com/2009/03/31/backgrounds-in-web-design-examples-and-best-practices-2/
• https://www.worldconcern.org/social/index.htm

• Nice footer: https://sunlightlabs.com/contests/appsforamerica2/
• https://www.instantshift.com/2009/04/30/80-perfect-ending-of-modern-website-design-footers/
• https://www.cssbake.com/

• Style changer: https://green-beast.com/experiments/php_style_changer.php?PSC

• https://www.firefly-multimedia.com/chatterbox/?p=26

• https://www.smashingmagazine.com/2009/06/09/smart-fixes-for-fluid-layouts/

• Home page – https://net.tutsplus.com/tutorials/javascript-ajax/create-a-simple-powerful-product-highlighter-with-mootools/
• Buttons: https://sixrevisions.com/tutorials/photoshop-tutorials/how-to-create-a-slick-and-clean-button-in-photoshop/
• Tooltips: https://developer.yahoo.com/yui/examples/container/tooltip-multi_clean.html
• https://vandelaydesign.com/blog/galleries/button-design-showcase/
• https://sixrevisions.com/tutorials/photoshop-tutorials/how-to-create-a-slick-and-clean-button-in-photoshop/
• https://www.emblematiq.com/niceforms/v20/niceforms.html (Nice search button)
• blockquotes: https://www.inquisitr.com/5955/gmail-canned-response-says-a-lot-about-google/
• CSS swap hover: https://min.frexy.com/lab/css-swap-hover/sample1.html
• https://www.smashingmagazine.com/2009/06/04/6-free-psdxhtml-templates/
• https://flowplayer.org/tools/demos/index.html
• https://www.minervity.com/features/inspire_me/52-professional-website-user-interface-photoshop-tutorials/
• https://web-patterns.net/

• https://www.smashingmagazine.com/2009/04/02/10-impressive-simple-design-techniques/
• https://www.alistapart.com/articles/taking-the-guesswork-out-of-design/
• https://davidwalsh.name/css-enhancements-user-experience
• https://sixrevisions.com/tutorials/photoshop-tutorials/how-to-create-a-clean-web-20-style-web-design-in-photoshop/
• https://www.creativepro.com/article/how-choose-colors-everyone-likes
• https://www.ted.com/index.php/talks/joann_kuchera_morin_tours_the_allosphere.html
• https://psd.tutsplus.com/tutorials/designing-tutorials/9-essential-principles-for-good-web-design/
• https://psd.tutsplus.com/articles/inspiration/teach-yourself-graphic-design-a-self-study-course-outline/
• https://www.webdesignbooth.com/15-extremely-useful-css-grid-layout-generator-for-web-designers/
• https://www.webdesignerdepot.com/2009/06/10-tips-to-create-a-more-usable-web/
• https://www.smashingmagazine.com/2009/06/15/take-your-design-to-the-next-level-with-css3/
• https://ideas.bighugelabs.com
• https://www.smashingmagazine.com/2009/06/24/module-tabs-in-web-design-best-practices-and-solutions/

• https://en.wikipedia.org/wiki/Help:Wikipedia:_The_Missing_Manual

• https://www.digitalia.be/software/slimbox
• https://www.pierrebertet.net/projects/jquery_superbox/
• https://planetozh.com/projects/lightbox-clones/

• https://wpwebhost.com/best-wordpress-design-awards-time-to-vote/
• https://biology.plosjournals.org/perlserv/?request=index-html&issn=1545-7885
• https://plugins.movabletype.org/multiblog/
• https://guides.rubyonrails.org/contribute.html
• https://twitter.threadless.com/
• https://lpi.oregonstate.edu/infocenter/glossary.html
• https://vandelaydesign.com/blog/galleries/best-educational-websites/
• “First-time? Check here” https://serverfault.com/
• https://sixrevisions.com/design-showcase-inspiration/25-great-examples-of-using-gradient-effects-in-web-designs/
• https://dzineblog.com/2009/06/50-beautiful-website-designs-for-your-inspiration.html
• https://england.shelter.org.uk/get_advice
• https://vandelaydesign.com/blog/galleries/best-non-profit-websites/
• https://www.dwell.com/articles/interview-evan-kleiman-on-good-food.html
• https://news.bbc.co.uk/2/hi/entertainment/8102614.stm
• https://www.wired.com/wiredscience/
• https://www.scientificamerican.com/biology
• https://creativecommons.org/
• Dark site: https://probablyinteractive.com/2009/3/29/Amazon%20EC2%20+%20Chef%20=%20Mmmmm.html

• https://videolectures.net/eccs08_cohen_apcstis/
• https://videolectures.net/dnevi_borkakoti_bsbos/
• https://www.ted.com/index.php/talks/craig_venter_on_dna_and_the_sea.html
• https://videolectures.net/google_levinson_hbcd/
• https://videolectures.net/google_locksley_hbfi/
• https://www.1lec.com/Genetics/Circular%20DNA%20Replication/index.html

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